Projects
With our Helmholtz Imaging Projects, Helmholtz Foundation Model Initiative (HFMI) and third-party funded projects, we aim to initiate cross-cutting research collaborations and identify innovative research topics in the field of imaging and data science.
Helmholtz Imaging offers a funding line of Helmholtz Imaging Projects, striving to seed collaborations between centers and across research fields. They are a strong incentive to enable interdisciplinary collaboration across the Helmholtz Association and an incubator and accelerator of the Helmholtz Imaging network.
In addition to our Helmholtz Imaging Projects, the Helmholtz Imaging team has secured external funding for third-party projects contributing their knowledge and expertise on cutting-edge imaging methodology.
Join us in unlocking the limitless potential of Helmholtz Imaging!
Find out more about Helmholtz Imaging Project call in this summary.
Helmholtz Imaging Projects
PlastoView
Microplastic Detection with the PlastiScope
Water quality is essential for ecosystems and human health, yet it's increasingly threatened by microplastics. This project develops image-based methods for detecting both plankton and microplastics using a new low-cost, mobile system.
EMSIG
Event-driven Microscopy for Smart Microfluidic Single-cell Analysis
Microfluidic live-cell imaging (MLCI) unlocks spatio-temporal insights into population heterogeneity emerging from a single cell. EMSIG brings smart live-event detection capabilities to MLCI to facilitate the adaptive optimization of biological event resolution and autonomously counteracting deteriorating image qualities.
SyNaToSe
Leveraging Cross-Domain Synergies for Efficient Machine Learning of Nanoscale Tomogram Segmentation
The aim is to develop an adaptable algorithm that can be used to perform different tasks in data and image analysis without needing to be trained with new, laboriously annotated images for each separate task.Helmholtz Foundation Model Initiative (HFMI) Projects
Synergy Unit
The Synergy Unit amplifies the Helmholtz Foundation Model Initiative's impact by developing AI principles for diverse fields. Collaborating with HFMI projects, it focuses on knowledge sharing, community building, and representation to ensure the initiative's lasting influence.
AqQua
AqQua aims to build the first foundational pelagic imaging model using billions of aquatic images worldwide. These images, spanning species from plankton, will help an AI classify species, extract traits, and estimate carbon content, offering key insights into biodiversity, ecosystem health, and the biological carbon pump's role in climate regulation.
The Human Radiome Project (THRP)
The Human Radiome Project (THRP) aims to drive a paradigm shift in medical research, providing novel insights into human health and disease through the power of AI. By integrating diverse radiological data, it seeks to enable groundbreaking advancements in personalized medicine, enhancing diagnostic accuracy and improving patient care.UNLOCK – Benchmarking Projects
SCHEMA – profiling Spatial Cancer HEterogeneity across modalities to benchmark Metastasis risk prediction
SCHEMA creates a benchmark dataset linking tumor samples with metastasis outcomes to enable machine-learning models that predict metastasis risk and support clinical decision-making.
Pero – Unlocking ML Potential: Benchmark Datasets on Perovskite Thin Film Processing
Addressing the lack of standardized, FAIR benchmark datasets in perovskite photovoltaics. Pero enables reproducible AI models for efficiency prediction, material classification, and defect detection, which are critical for industrial scaling of sustainable energy technologies.
AMOEBE: lArge-scale Multi-mOdal Microbial livE-cell imaging BEnchmark
Building a large-scale, FAIR benchmark for AI-driven analysis of microbial communities using time-lapse microscopy to advance understanding of microbial dynamics, ecosystem stability, and their role in health and biotechnology.Third-Party Projects
FONDA: Dependability, Adaptability and Uncertainty Quantification for Data Analysis Workflows in Large-Scale Biomedical Image Analysis
The project aims to enhance infrastructures for machine learning (ML)-intensive DAWs in advanced biomedical imaging applications.
SFB Transregio 154 – C06: Transport metrics for analysis and optimization of network problems
SFB TRR 154 is a project of the German Research Foundation (DFG) and combines integer-continuous methods, model adaptation, and numerical simulation, to analyze and optimize gas markets, infrastructure, and control of networks. The third funding period specifically focuses on the transition from natural gas to hydrogen.
BestMeta
Behavioral Standard Metadata
Developing metadata standards and FAIR analysis pipelines for Video Tracking Assays (VTAs) in toxicology and medical sciences